Labs(y = "Relative abundance", x = "Site age since restoration (years)") + Scale_y_continuous(labels = scales::percent_format()) + Geom_bar(aes(), stat="identity", position="fill") + (Sample, levels = level_order)), Sample) plot graphī_ra_cont <- ggplot(Bacteriaphyseq, aes(x=Sample, y=Abundance, fill=Phylum)) + "NelBoT", "TauMcB", "HamMin", "ChrRic", "NplHrs","HamCla", "InvKBR", "WelOWR")īacteriaphyseq <- arrange(transform(Bacteriaphyseq, Sample = factor Level_order <- c("NelMRY", "WelOCH", "DunIsP", "InvWaR", "TauCaP", "ChrMrs", "HamAva", "NplPer", "InvEsW", "WelMtA", "DunSiH", (restoration_status, levels = restoration_status_order)), Restoration_status_order <- c("restored", "remnant")īacteriaphyseq <- arrange(transform(Bacteriaphyseq, restoration_status = factor Levels(Bacteriaphyseq$restoration_status) reorder facets by restored first and remnant second But I don't want to show the site codes on the graph, I want to show age along the x axis so it is simple to view, hence scale_x_discrete is labelling the site codes with their actual age in years,Īny help would be greatly appreciated! Cannot for the life of me find a solution which involves removing the x axis labels/inputting nothing into the x axis labels for just one facet. Using cowplot to create multiple plots in one figure. There are still other things you can do with facets, such as using space 'free'.The Cookbook for R facet examples have even more to explore. "Sample" contains the site codes and "level_order" is ordering them from youngest to oldest restored forests along the x axis. ggplot2 with facet labels as the y axis labels. The variable "restoration_status" in my excel sheet groups the sites into either the restored or remnant category. I m using a phyloseq object called Bacteriaphyseq in this example containing Bacterial OTU data. I could of course just edit over top of this in Inkscape but would like a way of coding this in. I want the x axis in the remnant facet to be blank. However, the age for the restored facets is repeating automatically into the remnant facet when I use facet_grid. I'm looking at Bacterial relative abundance in restored forests with 3 remnant forests in a separate facet.
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